Calling of a entity bean from a session bean is not app server dependent. If a session bean needs to invoke methods of entity bean, it has to do in the same standard way. It does have to use the JNDI lookup too. And you can of course use weblogic server.
For example :
The above is session bean. The client invokes the calcBonus() method and this method creates an instance of Entity Bean, the code given as follows.
Also refer :
http://www.javaranch.com/ubb/Forum11/HTML/000594.html The link mentioned in the above has examples with various combinations of
J2EE technologies.
HTH