well i am not an ibm fanatic but the deployment process with AAT is really cool, when you have some experience. however, i didnt find any mechanism to deploy beans automatically. i guess ibm provides this with some tool (of course you have to buy it ...) like Websphere Studio Application Development.
weblogic does have tools to generate deployment descriptors, create stubs and deploy the bean, so you can use it with batchfiles and
ant. however, i like to deploy the beans with the web console. so i generate dd with DDInit and add descriptors, before making the jar file and deploy it on the web interface.