If you're lucky a 3rd party middelware solution like Oracle Sensor Edge Server supports the particular make and model of the RFID reader you want to use.
It could also prove to be a more robust solution if you ever need to switch to, or support additional hardware.
A couple of years ago, me and a fellow student had to use JNI to wrap the obscurely documented .dll of a passive RFID reader.
That's a hell I recommend you avoid at all costs
Build a man a fire, and he'll be warm for a day. Set a man on fire, and he'll be warm for the rest of his life.