Assuming that by modules you mean gems, then Bundler is your best bet:
http://gembundler.com/
Rails 3 ships with Bundler. If you're not using Rails 3, you can still install Bundler as a gem.
A normal bundle install will only save gems to your local system. However a bundle package will include the gems in the project itself:
http://gembundler.com/bundle_package.html
You will likely still use warbler but do so after running bundler.